Seyed Ali Nabavizadeh1, Farima Safari1, Mozhdeh Zamani2 and Hadi Ghasemi1,2*
1Department of Biochemistry, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
2Autophagy Research Center, Department of Biochemistry, School of Medicine, University of Medical Sciences, Shiraz, Iran
*Corresponding Author: Hadi Ghasemi, Department of Biochemistry, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran.
Received: January 29, 2024; Published: February 07, 2024
Background: PTK2 (focal adhesion kinase) is implicated in cancer progression and metastasis. This study was aimed to comprehensively analyze the PTK2 expression patterns, protein interactions, and its correlation with immune infiltration in bladder cancer to elucidate its clinical relevance.
Methods: Public databases including The Cancer Genome Atlas, UALCAN, STRING, and Tumor Immune Estimation Resource were evaluated. Differential PTK2 mRNA expression in bladder tumors versus normal tissues was evaluated. PTK2 correlations with cancer stage, gender, immune infiltrates, and integrin β1 expression were examined. Protein-protein interaction networks were generated using STRING.
Results: PTK2 was significantly overexpressed in bladder cancer, especially in higher-stage tumors. PTK2 positively correlated with B cells and macrophages but negatively correlated with CD4+ T cells and dendritic cells. Increased CD8+ T cell infiltration is associated with a better prognosis. Protein network analysis showed that PTK2 interacts with several proteins including INTB1, INTB3, PTEN, PI3K, CRK, PXN, VCL, BCAR1, GRB2, and SRC. Gene expression analysis revealed a positive correlation between PTK2 and INTB1 gens.
Conclusions: Bioinformatics analyses implicate PTK2 overexpression in bladder cancer progression and associations with immunosuppressive microenvironments. Findings suggest PTK2 may be a potential prognostic biomarker and therapeutic target warranting further investigation. More experimental validation is needed to confirm computational perspectives.
Keywords: PTK2; INTB1; Bladder Cancer
Citation: Hadi Ghasemi.,et al. “PTK2 mRNA Expression in Bladder Cancer: Insights from Multi-Dimensional Analysis and Gene Interaction Networks”.Acta Scientific Cancer Biology 8.2 (2024): 22-30.
Copyright: © 2024 Hadi Ghasemi., et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.