Acta Scientific Biotechnology

Review Article Volume 2 Issue 6

The Structure of Globular Proteins with Accompanied Spiral Structures Parallel and Antiparallel Amino Acid Residues

Gennadiy Vladimirovich Zhizhin*

Russian Academy of Natural Sciences, St. Petersburg, Russia

*Corresponding Author: Gennadiy Vladimirovich Zhizhin, Russian Academy of Natural Sciences, St. Petersburg, Russia.

Received: August 07, 2021; Published: Augusst 10, 2021

Abstract

  Using the theory of polytopic prismahedrons [1-4], the structure of complete filling (partitioning) of the space of globular proteins with residues of amino acid molecules, accompanied by the formation of various conformations of fibrillar proteins: spirals of structures with parallel and antiparallel amino acid residues, is investigated. Since the residue of an amino acid is geometrically an object of dimension 4 (a tetrahedron with a center), the structure of a globular protein is modeled by a set of connected tetrahedrons with a center, which form a space of the highest dimension. Examples of the thus obtained native structures of the highest dimension that simulate the structure of globular proteins are given.

Keywords: Amino Acid; Polytopic Prismahedrons; Enzymes, Hemoglobin

References

  1. Zhizhin GV. “Chemical Compound Structures and the Higher Dimension of Molecules: Emerging Research and Opportunities”. IGI Global (2018).
  2. Zhizhin GV. “The Geometry of Higher-Dimensional Polytopes”. IGI Global (2019a).
  3. Zhizhin GV. “Attractors and Higher Dimensions in Population and Molecular Biology”. IGI Global (2019b).
  4. Zhizhin GV. “Normal Partitions and Hierarchical Fillings of N-Dimensional Spaces”. IGI Global (2021a).
  5. Dixon M and Webb EC. “Enzymes”. Longman Group Ltd (1979).
  6. Metzler DE. “Biochemistry. The Chemical Reactions of Living Cells”. Academic Press, United States (1980).
  7. Lehninger AL. “Principles of Biochemistry”. Worth Publishers, United States (1982).
  8. Koolman J and Roehm KH. “Color Atlas of Biochemistry”. Thime, Stuttgart, New York (2013).
  9. Zhizhin GV. “World - 4D”. Polytechnic Service, Russia (2014).
  10. Zhizhin GV and Diudea MV. “Space of Nanoworld”. In MV Put, MC Mirica (Eds), Sustainable Nanosystems, Development, Properties, and Applications, IGI Global (2016).
  11. Zhizhin GV. “The Polytope of Hereditary Information: Structure, Location, Signification”. Biochemistry and Modern Applications 2 (2019c): 56-62.
  12. Zhizhin GV. “Hidden Nucleic Order Bond?” Acta Scientific Biotechnology4 (2020): 34-36.
  13. Hilbert D. “Gesammelte Abhandlangen”. Archive Mathematics and Physics1 (1901): 44-63, 213-237.
  14. Poincaré A. “Analysis situs”. Journal of Polytechnic School 1 (1895): 1 – 121.

Citation

Citation: Gennadiy Vladimirovich Zhizhin. “The Structure of Globular Proteins with Accompanied Spiral Structures Parallel and Antiparallel Amino Acid Residues”. Acta Scientific Computer Sciences 2.6 (2021): 06-09.

Copyright

Copyright: © 2021 Gennadiy Vladimirovich Zhizhin. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.




Metrics

Acceptance rate35%
Acceptance to publication20-30 days

Indexed In




News and Events


  • Certification for Review
    Acta Scientific certifies the Editors/reviewers for their review done towards the assigned articles of the respective journals.
  • Submission Timeline for Upcoming Issue
    The last date for submission of articles for regular Issues is December 25, 2024.
  • Publication Certificate
    Authors will be issued a "Publication Certificate" as a mark of appreciation for publishing their work.
  • Best Article of the Issue
    The Editors will elect one Best Article after each issue release. The authors of this article will be provided with a certificate of "Best Article of the Issue"

Contact US